Find a TenderClosed
Published 6 Dec 2023, 18:48 GMT

Official UK procurement notice

Services for slide digitisation - multi-modal

Official notice

Authority: GENOMICS ENGLAND LIMITED (Central government)

ServicesOpen procedureAccelerated
Published estimate£2,250,000exc. VAT
Submissions closed 22 Dec 2023
Notice summaryFrom the published notice

Genomics England are looking for a provider to support in digitising all the histopathology slides from the participants of the 100,000 Genomes Project so they can be transferred to the multi-modal research environment. The multi-modal project provides an enriched data set for cancer research by adding of imaging data from pathology slides and radiology images (e.g., x-ray, CT and MRI) alongside whole genome data.

What is being bought

Published requirement description

Genomics England are looking for a provider to support in digitising all the histopathology slides from the participants of the 100,000 Genomes Project so they can be transferred to the multi-modal research environment.

The multi-modal project provides an enriched data set for cancer research by adding of imaging data from pathology slides and radiology images (e.g., x-ray, CT and MRI) alongside whole genome data.

The multi-modal project aims are:

  • Complete the scanning and digitisation of the remaining 200,000 histopathology slides for the 100,000 Genomes Project participants.
  • Make accessible to researchers a secure library of linked genomic, clinical and imaging cancer data accompanied with the tooling needed to accelerate the understanding of the morphological, genomic and clinical changes that occur in cancer.
  • Lead the research community to generate new insights from the data to support diagnostic, prognostic and precision medicine discovery.

CPV: Health and social work services

The lotProcurement structure

single lot · no lot value published
Lot #1The requirements include the following:

The requirements include the following:

  • To provide a high quality, clinical grade digital pathology service.
  • The successful supplier must be of reputable standard with known clinical and academic standing and engagement with the Royal Collage of Pathologists (as this is a national digitisation programme).
  • Ideally based within an NHS site to allow for receipt of identifiable information from participants and not require formal MTAs for movement of slides.
  • Supplier must demonstrate secure storage for identifiable glass slides.
  • Deployment team already established to perform similar process, at scale (expected volumes of 4000 slides per week).
  • Clear protocol for handling and anonymisation of participant information and slides.
  • Anonymise, scan and digitise 200,000 histopathology slides from solid cancer participants in the 100,000 Genomes Project over one year.
  • Digitisation of slides must be performed at x40 magnification on Leica GT450 scanner, in line with previous configurations and analysis.
  • Supplier will need to provide scanning of selected slides on a variety of scanners for variability.
  • Digital images need to be of DICOM compatible format.
  • Supplier will need to have logistics in place to digitise from CellNass directly.
  • Transfer these digitised slides to the Genomic England's multi-modal research environment over IBM Aspera.
  • Capability to receive and store histopathology slides.
  • Capability to conduct quality control protocols and scan all slides.
  • Capability to store and transfer image data. Additional information: If you have not already done so, you will need to register on our Bravo portal

public.bravosolution.co.uk/genomicsengland/web/… ↗

Please register on the e-tendering portal (Bravo) on the link provided. Once registered, you can find the opportunity under project title Services for slide digitisation - multi-modal or the project reference "project_867"

All correspondence should be sent via the portal.

Delivery: London
Variant bids: not allowed

What it takes to win
i

How this buyer will score bids.

The evaluation criteria and weights exactly as published on the notice, grouped by family (price, quality, social value and so on).

Evaluation split and conditions of participation as published; the tender pack may add more
Conditions of participation3
  • Suitability

    See tender documentation

  • Economic & financial standing

    See tender documentation

    Minimum: See tender documentation
  • Technical & professional ability

    See tender documentation

    Minimum: See tender documentation

Procedure terms & legal framework

From the official record
Procedure method
Open procedure
Legal basis
CELEX · 32014L0024 Public Contracts Regulations 2015 (Directive 2014/24/EU)
Procurement category
Services
Notice status
Closed
Procurement threshold
Unspecified in notice
Regulatory regime
Standard
Commercial structure
Stand-alone contract (no framework)
Competition type
Competitive procedure
GPA / WTO covered
Yes (GPA)
Recurring procurement
No (one-off requirement)
First published
6 Dec 2023, 18:48 GMT
Last source update
6 Dec 2023, 18:48 GMT
Award evaluation window
2 Jan 2024 – …
FTS notice number
2023/S 000-036027
Accelerated

The accelerated procedure has been used due to the urgent nature of requirements, the normal time limits are rendered impractical. Genomics England also has a responsibility to manage the wider operational and delivery risk of not being able to secure this services in a timely manner.

Under the Public Contracts Regulations (PCR), authorities can reduce the minimum timescales for the open procedure, the restricted procedure and the competitive procedure with negotiation if a state of urgency renders the standard timescales impracticable. The minimum time limits vary. For procurements under the open procedure, timescales can be reduced to 15 days for receipt of tenders plus the minimum 10 days for the standstill period.

Classification (CPV)
Health and social work services
Delivery area
London (UKI)
Official registry OCID
ocds-h6vhtk-042248 Find a Tender
Contract terms
Performance terms

See tender documentation

How it was run

Official notice
Run through: Jaggaer · Who buys & how to bid on JAGGAER
Supplier login requiredLanguage: EN
Access & registration note: Free; latest Chrome/Edge/Firefox only — corporate browsers fail
Submission deadline
22 Dec 2023, 12:00 GMT
Submission channel
{"electronicSubmission","written"}
Accepted languages
en
Bids opened
2 Jan 2024, 12:00 GMT
Detailed submission instructions & authority contactsFrom official release

Timeline

6 Dec 2023 → 2 Jan 2024 · 3 dates
  1. Notice published
    6 Dec 2023, 18:48 GMT
  2. Submission deadline
    22 Dec 2023, 12:00 GMT
  3. Bids opened
    2 Jan 2024, 12:00 GMT

Contracting authority & participating public bodies

GENOMICS ENGLAND LIMITED

Contracting authorityCentral GovernmentBody governed by public lawHealth One Canada Square, LONDON, London, E14 5ABContact name, email Published organisation website ↗

Official documents & specifications

Official links; attachments are not copied

No document links were published on the notice.