Genotyping Services

{
  "id": "029740-2021",
  "tag": [
    "award",
    "contract"
  ],
  "bids": {
    "statistics": [
      {
        "id": "1",
        "value": 1,
        "measure": "bids",
        "relatedLot": "1"
      }
    ]
  },
  "date": "2021-11-30T18:06:48Z",
  "ocid": "ocds-h6vhtk-02fb9d",
  "buyer": {
    "id": "GB-FTS-33357",
    "name": "London School of Hygiene & Tropical Medicine"
  },
  "awards": [
    {
      "id": "029740-2021-LSHTM-2021-39-1",
      "title": "Genotyping Services",
      "status": "active",
      "suppliers": [
        {
          "id": "GB-FTS-36304",
          "name": "Centre for Proteomic & Genomic Research"
        }
      ],
      "relatedLots": [
        "1"
      ]
    }
  ],
  "tender": {
    "id": "LSHTM-2021-39",
    "lots": [
      {
        "id": "1",
        "status": "cancelled",
        "hasOptions": false,
        "description": "Genotyping provides a comprehensive view of the genome and able to detects single nucleotide polymorphisms (SNPs) and other variations across the genome as well as identify potential causative disease variants for further targeted studies.\n8,024 Samples are to be genotyped on the illumine-H3Africa Consortium Array v2, which was specially designed to enable identification of genetic associations with common and rare traits among African populations. Additional information: This procurement is being managed by the MRC/UVRI and LSHTM Uganda Research Unit.",
        "awardCriteria": {
          "criteria": [
            {
              "type": "price"
            }
          ]
        }
      }
    ],
    "items": [
      {
        "id": "1",
        "relatedLot": "1",
        "deliveryLocation": {
          "description": "1st Floor, St. Peters Mall Cnr. Anzio and Main Road Observatory 7925 Cape Town, South Africa"
        },
        "deliveryAddresses": [
          {
            "region": "ZA"
          }
        ],
        "additionalClassifications": [
          {
            "id": "85150000",
            "scheme": "CPV",
            "description": "Medical imaging services"
          },
          {
            "id": "85148000",
            "scheme": "CPV",
            "description": "Medical analysis services"
          }
        ]
      }
    ],
    "title": "Genotyping Services",
    "status": "complete",
    "coveredBy": [
      "GPA"
    ],
    "legalBasis": {
      "id": "32014L0024",
      "scheme": "CELEX"
    },
    "description": "The GEN-CKD study (Genetic Variation on kidney function, diabetes), based at the MRC/UVRI & LSHTM Unit in Uganda, requires genotyping services. The genotyping services will be carried out through the H3Africa array held by CPGR (Centre for Proteomic & Genomic Research) in south Africa.",
    "classification": {
      "id": "73111000",
      "scheme": "CPV",
      "description": "Research laboratory services"
    },
    "procurementMethod": "limited",
    "mainProcurementCategory": "services",
    "procurementMethodDetails": "Award procedure without prior publication of a call for competition",
    "procurementMethodRationale": "The Centre for Proteomic and Genomic Research in South Africa as most suitable to provide the services. They are uniquely the only facility that can genotype using the required H3Africa array which they co-developed specially for African researchers with Illumina (equipment manufacturer). Genotyping to be done against the H3 Africa Array (chip). This array was specifically designed by a consortium of African research organisations and experts, to establish a reference panel that is more representative of African genomic variation. More on the H3Africa consortium and the array here: (https://h3africa.org/index.php/2019/12/12/h3africa-chip-faq/)\nThe H3Africa consortium selected the Life science equipment manufacturer, Illumina, to develop a chip with the array, into their array scanner: https://www.h3abionet.org/h3africa-chip\nhttps://h3africa.org/index.php/2019/12/12/h3africa-chip-faq/\nIllumina provided their iscan system with the H3Africa chip and selected the non-profit CPGR as the lab where this would be placed for consortium members and genetic researchers throughout Africa to genotype samples against the chip’s reference panel:\nhttps://h3africa.org/index.php/2019/12/12/h3africa-chip-faq/\nhttps://www.cpgr.org.za/south-africas-centre-for-proteomic-genomic-research-cpgr-launches-iscan-platform-in-support-of-h3africa-and-genomics-research-in-africa/\nCPGR have the only instrument running the specific H3 Africa chip.\nBased on all the above, we believe there would be no benefit to running an open competitive selection process as the requirements are restrictive and can only be fulfilled by one lab.",
    "procurementMethodRationaleClassifications": [
      {
        "id": "D_OUTSIDE_SCOPE",
        "scheme": "TED_PT_AWARD_CONTRACT_WITHOUT_CALL",
        "description": "The procurement falls outside the scope of application of the directive"
      }
    ]
  },
  "parties": [
    {
      "id": "GB-FTS-33357",
      "name": "London School of Hygiene & Tropical Medicine",
      "roles": [
        "buyer"
      ],
      "address": {
        "region": "UKI31",
        "locality": "London",
        "postalCode": "WC1E 7HT",
        "countryName": "United Kingdom",
        "streetAddress": "Keppel Street,"
      },
      "details": {
        "url": "http://www.lshtm.ac.uk",
        "buyerProfile": "https://uk.eu-supply.com/ctm/Company/CompanyInformation/Index/104519",
        "classifications": [
          {
            "id": "BODY_PUBLIC",
            "scheme": "TED_CA_TYPE",
            "description": "Body governed by public law"
          },
          {
            "id": "07",
            "scheme": "COFOG",
            "description": "Health"
          }
        ]
      },
      "identifier": {
        "id": "RC000330",
        "legalName": "London School of Hygiene & Tropical Medicine"
      },
      "contactPoint": {
        "name": "Paul Pester",
        "email": "paul.pester@lshtm.ac.uk",
        "telephone": "+44 02079272471"
      }
    },
    {
      "id": "GB-FTS-36304",
      "name": "Centre for Proteomic & Genomic Research",
      "roles": [
        "supplier"
      ],
      "address": {
        "region": "ZA",
        "locality": "Cape Town",
        "countryName": "South Africa",
        "streetAddress": "1st Floor, St. Peters Mall Cnr. Anzio and Main Road Observatory 7925"
      },
      "details": {
        "scale": "large"
      },
      "identifier": {
        "legalName": "Centre for Proteomic & Genomic Research"
      }
    },
    {
      "id": "GB-FTS-4330",
      "name": "The Royal Courts of Justice",
      "roles": [
        "reviewBody"
      ],
      "address": {
        "locality": "London",
        "postalCode": "WC2A 2LL",
        "countryName": "United Kingdom",
        "streetAddress": "The Strand"
      },
      "identifier": {
        "legalName": "The Royal Courts of Justice"
      }
    },
    {
      "id": "GB-FTS-3611",
      "name": "London School of Hygiene & Tropical Medicine",
      "roles": [
        "reviewContactPoint"
      ],
      "address": {
        "locality": "London",
        "postalCode": "WC1E 7HT",
        "countryName": "United Kingdom",
        "streetAddress": "Keppel Street"
      },
      "identifier": {
        "legalName": "London School of Hygiene & Tropical Medicine"
      },
      "contactPoint": {
        "email": "procurement@lshtm.ac.uk"
      }
    }
  ],
  "language": "en",
  "contracts": [
    {
      "id": "029740-2021-LSHTM-2021-39-1",
      "title": "Genotyping Services",
      "value": {
        "amount": 7806027,
        "currency": "ZAR"
      },
      "status": "active",
      "awardID": "029740-2021-LSHTM-2021-39-1",
      "dateSigned": "2021-11-28T00:00:00Z"
    }
  ],
  "description": "The Authority will allow a minimum 10 calendar day standstill period between notifying the award decision and awarding the contract.\nShould additional information be required it should be requested from the addressee in section I.1. Aggrieved parties who have been harmed or are at risk of harm by breach of the procurement rules have the right to take action in the High Court (England and Wales). Any such action is subject to strict time limits in accordance with the Public Contracts (Amendments) Regulations 2015.",
  "initiationType": "tender"
}